大豆育种群体苗期成株期耐旱性评价及全基因组关联分析
目录
摘要 I
关键词 I
Abstract II
引言
引言 1
1 材料与方法 2
1.1 供试材料 2
1.2 试验设计 2
1.3 测量性状 2
1.4 表型数据分析 2
1.5 耐旱性评价方法 3
1.6 群体结构与GWAS分析 3
2 结果与分析 3
2.1 大豆苗期耐旱性的表型分析和材料鉴定 3
2.1.1 大豆苗期耐旱性状的描述性统计分析 3
2.1.2 大豆苗期耐旱性状的相关性分析 4
2.1.3 大豆苗
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期耐旱性状的方差分析 4
2.1.4 大豆苗期耐旱性状耐旱系数的频次分布图 4
2.1.5 根据大豆苗期耐旱性对试验材料类型的划分 5
2.2 大豆成株期耐旱性的表型分析和材料鉴定 7
2.2.1 大豆成株期耐旱性状的描述性统计分析 7
2.2.2 大豆成株期耐旱性状的相关性分析 7
2.2.3 大豆成株期耐旱性状的方差分析 8
2.2.4 大豆成株期旱性状耐旱系数的频次分布图 9
2.2.5 根据大豆成株期耐旱性对试验材料类型的划分 9
2.3 群体结构与GWAS分析 10
2.3.1 群体结构分析 10
2.3.2 大豆苗期耐旱性状的全基因组关联分析 10
2.3.3 大豆成株期耐旱性状的全基因组关联分析 11
3 讨论 12
3.1 大豆耐旱性的鉴定 12
3.2 大豆耐旱性状的关联分析 12
致谢 12
参考文献 13
图1 大豆苗期4个耐旱性状耐旱系数的频次分布图 5
图2 大豆成株期3个耐旱性状耐旱系数的频次分布图 9
图3 197份江淮大豆自然群体的群体结构 10
表1 干旱胁迫和对照条件下大豆苗期耐旱性状的描述性统计 3
表2 干旱胁迫和对照条件下大豆苗期耐旱性状的相关分析 4
表3 大豆苗期耐旱性状的方差分析 4
表4 大豆苗期耐旱类型与划分标准 6
表5 干旱胁迫和对照条件下大豆成株期耐旱性状的描述性统计 7
表6 干旱胁迫和对照条件下大豆成株期耐旱性状的相关分析 8
表7 大豆成株期耐旱性状的方差分析 8
表8 大豆成株期耐旱类型与划分标准 9
表9 大豆苗期耐旱性状的全基因组关联分析 10
表10 大豆成株期耐旱性状的全基因组关联分析 11
江淮大豆育种群体苗期、成株期耐旱性评价及全基因组关联分析
Assessment of Drought Tolerance and GenomeWide Association Studies for Drought Tolerant Traits at Seeding and Adult Stage in a Population of YangtzeHuai Soybean Breeding Lines
Student majoring in Science and engineering of seed Yeyang Weng
Tutor Xiaohong He
Abstract: Soybean is an important source of plant protein and edible oil for human. Drought is the leading adversely abiotic stress for soybean yield loss and so screening droughttolerant germplasms, exploring genetic architecture of drought tolerance and developing droughttolerant cultivars are important goals for soybean researchers. In this study, a population of 210 YangtzeHuai Soybean Breeding Lines was planted under both waterstressed and normalwatered environments in greenhouse and measured for drought tolerant traits. Water treatment was performed at seeding or adult stage of soybean. Using the phenotype data, the tested germplasms were classified into corresponding droughttolerance type. QTLs for drought tolerance were also detected by association with the genomewide 63,513 SNPs using the MLM(Q+K) model in TASSEL 5.0. Eight (eight, seven and nine) most drought tolerance and four (four, three and one) most drought sensitivity accessions were screened according to drought tolerance coefficient of shoot fresh weight (SFW) (shoot dry weight (SDW), plant height (PH) and plant height growth rate (PHGR)) at soybean seeding stage; Some materials were identified commonly by different traits, for example, 118/JiDou73, a most drought tolerance material, was identified simultaneously by SFW, SDW and PH. Five (seven and eight) most drought tolerance and five (one and two) most drought sensitivity accessions were screened based on drought tolerance coefficient of PH [number of grain per plant (NGPP) and 100 grain weight (HGW)] at soybean adult stage; However, no material was identified commonly by different traits. In the GWAS of drought tolerance at soybean seeding stage, 31 markertrait associations were found with R2 (ratio of phenotypic variation explained by marker) range from 7.01 to 11.27% at threshold of log(p)>4; Under the waterstressed condition, three, one and seven SNPs were associated with SFW, SDW and PH, respectively. In the GWAS of drought tolerance at soybean adult stage, 40 markertrait associations were uncovered with R2 8.14~9.98%; Under the waterstressed condition, five and four SNPs were associated with NGPP and HGW, respectively. These results were useful for developing droughttolerant soybean cultivars.
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